Reconstruction of synthetic networks generated using differential equation based methods. (A) How performance of our method varies with network size and noise (Red(*)-10 gene; Green(o)-25 gene; Blue(square)-50 gene). The X-axes represent the 5 levels of noise used, whereas the Y axes represent the corresponding performance measures (see text). (B)-(D) Comparison of performance with 3 other methods for the 10, 25 and 50-gene network. Red(+)-Proposed, Green(o)-BANJO, Blue(x)-BNFinder+BDe, Cyan(square)-BNFinder+MDL, Magenta(diamond)-TDARACNE. X axes-noise levels, Y axes-F-Score. See text for details.