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Table 2 General versus type-specific mutated genes

From: Cancer core modules identification through genomic and transcriptomic changes correlation detection at network level

Mutation type

Caner type

Gene lists

General

Breast cancer

TP53 CDKN2A ATM RAD51L3

Colon cancer

TP53 CDKN2A ATM RET STK11

ccRCC

TP53 CDKN2A ATM PTPRJ

NSCLC

TP53 CDKN2A ATM RAD51L3 NTRK2 PRKDC RET EPHB3

melanoma

TP53 CDKN2A NTRK2 PRKDC STK11 EPB41L2 PTPRJ EPHB3

gliomas

TP53 CDKN2A ATM RAD51L3 NTRK2 PRKDC RET EPB41L2

Type specific

Breast cancer

CDC27 CENPE DNAJA3

 

Colon cancer

CDK8

 

ccRCC

HUS1 FANCC

 

NSCLC

HUS1 CDK8 CASK

 

melanoma

IL4R PAK1 CDK5RAP1 PRC1 KIF5C KRT17

 

gliomas

ID3 ARHGDIG GATA6 AR RALBP1 MTA1