From: URDME: a modular framework for stochastic simulation of reaction-transport processes in complex geometries
Reaction
Description
Cellular location
(R1)
∅→ μ 1 V
Creation of cargo
Cell body
(R2–R5)
V ⇌ σ d σ b V k , d
Binding of V to microtubule
All domains
(R6,R7)
V k ⇌ σ dk σ kd V d
Reversal of direction
Microtubule
(R8)
V→ μ 2 ∅
Degradation of V