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Figure 2 | BMC Systems Biology

Figure 2

From: A regulatory network modeled from wild-type gene expression data guides functional predictions in Caenorhabditis elegans development

Figure 2

The Gold Standard Network (GSN) derived from the literature. The GSN is represented as a pair of mixed graphs, where solid lines with arrows indicate directed interactions and dashed lines without decorations indicate undirected interactions: the left graph depicts interactions between modules, and the right graph depicts interactions within modules. Since there is no difference between incoming and outgoing edges for the genes tbx-8 and tbx-9, they are represented as a single node in the between-groups graphs to minimize the number of edges displayed. The colors of the nodes, maintained throughout, correspond to their associated module: blue for initiation, yellow for ectoderm, gray for mesoderm, brown for mixed, and green for other.

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