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Table 4 TFs identified by network inference in terms of coverage.

From: A computational procedure for identifying master regulator candidates: a case study on diabetes progression in Goto-Kakizaki rats

4w 8w_12w 16w_20w
GK WKY GK WKY GK WKY
TF No. of regulated genes TF No. of regulated genes TF No. of regulated genes TF No. of regulated genes TF No. of regulated genes TF No. of regulated genes
Arntl 31 Max 10 Lhx5 24 Ywhae 18 Fus 10 Foxq1 32
Lhx2 22 Otx2 10 Etv1 23 Pfdn5 13 Smad5 10 Hoxa1 16
Sp2 18 Daxx 9 Ctnnb1 8 Atf1 11 Nfx1 9 Rbl2 16
Gabpa 13 Sim1 9 Rpa3 8 Cdk9 11 Hsf1 8 Zic2 12
Xpa 4 Tcf21 8 Zfp105 8 Hmgb2 11 Tlx3 8 Rorc 8
Foxs1 3 Gata5 7 Foxo3 7 Sfpq 9 Tp53 8 Tcfap4 6
   Tcfap2c 7 Hoxc5 6 Zfp281 9 Foxs1 7 Pttg1 5
   Meis3 5 Litaf 6 Cdk7 8 LOC679869 7 Ncoa3 4
   Rorc 5 Nr2f2 6 Ets2 8 Cbfb 6 Ccnh 3
   Snapc1 5 Foxo1 5 Hoxa1 8 Ctcf 6 Hif1a 3
   Zic2 5 Msx1 5 Nfe2l2 8 Glis2 6 Junb 3
   Meis1 4 Myocd 5 Nfil3 8 Irf7 6 Kcnip1 3
   Pou2af1 4 Pbx1 5 Six4 8 Nfkbib 6 Mtf1 3
   Srf 4 Tbpl1 5 Cux2 7 Nr1i2 6 Zfp148 3
   Stox2 4 Vdr 5 Mafg 7 Hdac1 5   
   Tcfcp2l1 4 Hltf 4 Nfkbia 7 Rfx5 5   
   Gtf2h2 3 Htt 4 Pgr 7 Tle1 5   
   Zfx 3 LOC680117 4 Ppp1r13b 7 Xpa 5   
     Mbd1 4 Tbpl1 7     
     Parp1 4 Cbfb 6     
     Rreb1 4 Ezh2 6     
     Smarcc1 4 Hbp1 6     
       Junb 6     
       Taf13 6     
       Tef 6     
  1. TFs found in both GK and WKY are indicated by bold letters.