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Table 2 Statistical significance of protein complexes obtained by various algorithms on DIP data

From: Discovering protein complexes in protein interaction networks via exploring the weak ties effect

 

MCL

DPClus

DECAFF

Coach

Our method-I

Our method-II

Predicted complexes

1116

1143

2190

746

686

620

Significant complexes

312

352

1653

622

536

519

Proportion (%)

34.2

30.8

75.5

83.4

78.1

83.7