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Table 1 Statistics of data sources

From: Supervised maximum-likelihood weighting of composite protein networks for complex prediction

  YEAST HUMAN
Data source Description # pairs # distinct proteins % complex edges # pairs # distinct proteins % complex edges
PPI Physical protein-protein interactions 106328 5429 5.8% 48098 6285 13.9%
L2-PPI Level 2 PPI 181175 3987 1.1% 131705 7913 5.5%
STRING Predicted functional association 175712 5964 5.7% 311435 14784 3.1%
PubMed Literature co-occurrence 161213 5109 4.9% 91751 10659 4.3%
All   531800 6084 2.1% 522668 17264 3.4%