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Table 3 Summary of overlapping gene proportions.

From: IntPath--an integrated pathway gene relationship database for model organisms and important pathogens

H. sapiens

KEGG vs WikiPathways

WikiPathways vs HumanCyc

HumanCyc vs KEGG

Overlap Genes

2,485

396

824

Unique Genes

4,410

3,735

5,369

Jaccard Coefficient

0.360

0.096

0.133

M. mus culus

KEGG vs WikiPathways

WikiPathways vs MouseCyc

MouseCyc vs KEGG

Overlap Genes

2,611

532

919

Unique Genes

5,168

4,214

5,662

Jaccard Coefficient

0.336

0.112

0.140

S. c ere visiae

KEGG vs WikiPathways

WikiPathways vs YeastCyc

YeastCyc vs KEGG

Overlap Genes

801

402

480

Unique Genes

996

601

1,317

Jaccard Coefficient

0.446

0.400

0.267

M. tuberculosis H37Rv

KEGG vs WikiPathways

WikiPathways vs MTBRvCyc

MTBRvCyc vs KEGG

Overlap Genes

141

60

432

Unique Genes

948

525

707

Jaccard Coefficient

0.129

0.103

0.379

  1. Summary of the number of overlap genes, number of unique genes, and Jaccard coefficient among three representative databases.