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Table 1 Average phased haplotype lengths of ReFHap and H-BOP

From: A fast and accurate algorithm for single individual haplotyping

  

l = 3

l = 6

l = 10

 

m =

140

211

281

351

74

111

148

185

44

67

89

111

e = .005

ReFHap

98.16

99.59

99.79

99.97

97.2

99.04

99.39

99.66

96.24

97.7

98.51

99.06

 

H-BOP

98.17

99.61

99.8

99.97

97.2

99.04

99.39

99.66

96.24

97.7

98.51

99.06

e = .01

ReFHap

97.99

99.6

99.68

99.9

97

98.87

99.32

99.59

95.68

97.81

98.73

99.13

 

H-BOP

98.07

99.63

99.7

99.9

97

98.87

99.32

99.59

95.69

97.81

98.73

99.13

e = .02

ReFHap

97.42

99.39

99.71

99.86

96.94

98.59

99.48

99.63

95.31

98.06

98.24

99.22

 

H-BOP

97.57

99.48

99.74

99.86

96.95

98.59

99.48

99.63

95.31

98.06

98.24

99.22

e = .05

ReFHap

96.6

98.88

99.49

99.77

95.61

98.31

99.14

99.5

94.25

97.56

98.62

98.87

 

H-BOP

96.94

99.09

99.63

99.84

95.76

98.42

99.15

99.51

94.33

97.56

98.62

98.87

  1. The numbers in the table are the average of 100 repeated tests.