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Table 1 SNP pairs detected when testing among SNPs located in the same genes.

From: Gene, pathway and network frameworks to identify epistatic interactions of single nucleotide polymorphisms derived from GWAS data

SNP1 p-value (SNP1) SNP2 p-value (SNP2) p-value (interaction) Distance correlation Genes
rs1994385 3.7 × 10-1 rs2389493 3.3 × 10-5 1.3 × 10-8 8 k 0.63 NDST3
rs2389493 3.3 × 10-5 rs6534079 3.0 × 10-1 1.6 × 10-8 17 k 0.63  
rs6421008 4.8 × 10-1 rs7827545 1.4 × 10-3 1.5 × 10-11 54 k 0.07 ZFAT
rs356127 9.2 × 10-1 rs2406898 1.5 × 10-5 9.4 × 10-9 63 k 0.37  
rs7853126 6.5 × 10-1 rs2406898 1.5 × 10-5 1.2 × 10-8 129 k 0.37 C9orf3
rs2584803 8.3 × 10-1 rs2406898 1.5 × 10-5 1.2 × 10-8 73 k 0.37  
rs17097262 3.4 × 10-1 rs7154773 5.7 × 10-5 1.7 × 10-10 10 k 0.04  
rs7154773 5.7 × 10-5 rs10130695 2.3 × 10-1 3.5 × 10-10 6.9 k 0.04 PPM1A
rs12323784 2.0 × 10-1 rs7154773 5.7 × 10-5 6.1 × 10-10 338 bp 0.05  
  1. Correlation: correlation coefficient between two SNPs