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Table 8 specificity/sensitivity/F-measure results on the two testing PPI networks with CYC-2008 and GO-CC benchmark complexes on Krogan_2006

From: Detection of protein complexes from affinity purification/mass spectrometry data

  MCL MCODE CFinder COACH CODEC-w0 CODEC-w1 Our method
CYC_2008        
Specificity 0.333 0.226 0.800 0.047 0.324 0.502 0.740
Sensitivity 0.520 0.048 0.600 0.822 1.000 1.000 1.000
F-Measure 0.406 0.080 0.686 0.088 0.489 0.668 0.850
GO_CC        
Specificity 0.265 0.231 0.739 0.026 0.298 0.443 0.729
Sensitivity 0.900 0.105 0.723 0.685 0.999 0.999 0.977
F-Measure 0.409 0.145 0.731 0.051 0.458 0.614 0.835