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Table 4 Confirmation of GAP’s novel predictions

From: Novel semantic similarity measure improves an integrative approach to predicting gene functional associations

Interactor Interaction Interaction Confirmed by: Journal Year Experimental
set pair type Pubmed ID    method
Random ACTN4 and SYNPO Complex 12042308 J Biol Chem 2002 Co-IP, Pull down
FGF2 and VEGFA Regulation 18948122 Microvasc Res 2009 N/A
NPHS1 and ACTN4 Direct 16837631 J Am Soc Nephrol 2006 Co-IP
VHL and SDHB Association 19208735 Endocr Relat Cancer 2009 N/A
  BRMS1 and SAP130 Complex 16914451 Nucleic Acids Res 2006 TAP Tag
Metastasis CD82 and AMFR Direct 18037895 Nat Med 2007 Co-IP
Suppressor KISS1 and KAL1 Association 22335740 N Engl J Med 2012 N/A
  KISS1 and MED23 Regulation 16964286 Oncogene 2007 ChIP
  1. This Table summarizes a list of confirmed interactions, types of the interactions, corresponding PubMed IDs, and the experimental methods used.