Advertisement
Table 4 Overview of metabolic pathway databases used
From: Consensus and conflict cards for metabolic pathway databases
| Database | Export formats used | Version | Downloaded from |
|---|---|---|---|
| EHMN | Excel | 2 | http://www.ehmn.bioinformatics.ed.ac.uk/ |
| H. sapiens Recon 1 | Flat file, SBML | 1 | http://bigg.ucsd.edu/ |
| HumanCyc | Flat file | 15.0 | http://biocyc.org/download.shtml |
| KEGG | Flat file, KGML | 58 | http://www.kegg.jp/kegg/download/ |
| Reactome | MySQL database | 36 | http://reactome.org/download/index.html |
