Consensus and conflict cards for metabolic pathway databases

BMC Systems Biology

Table 5 Pathway database content statistics

Genes: counts are based on the internal database identifiers and include genes encoding for a component of a protein complex as separate entities. EC numbers: including incomplete EC numbers. Reactions: if reactions only differ in direction and/or compartments they are counted as one. Pathways: counts for HumanCyc and Reactome are based on the lowest level of their pathway hierarchy.

ISSN: 1752-0509