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Table 1 Distribution of F. graminearum genes homologous to the TAP reference set and matching DNA-binding domain HMMs

From: Genomic clustering and co-regulation of transcriptional networks in the pathogenic fungus Fusarium graminearum

TAP class

Description

Count

    Taxonomic distribution

   

Fgr

Pez.

Fungi

Euk

B

Basal transcription factors and co-factors

63

4

10

15

34

C

Chromatin remodelling and histone modification

63

8

14

19

22

D

DNA-binding proteins

546

179

258

89

20

P

RNA polymerase subunits

27

4

4

4

15

O

Unclassified (CCR-NOT subunits, non-DNA-binding factors)

24

6

8

3

7

Total

 

723

    
  1. The TAP classes (B, C, D, P, O) were split into four taxonomic groups according to whether homologous genes were found only in F. graminearum (Fgr), only in Pezizomycotina (Pez) genomes, only in fungal genomes (Fungi), or widely detected within the eukaryotic genomes (Euk).