Figure 8
Simulation of the Calvin-Benson cycle. Another example of the capabilities of the Simulation Core Library has been obtained by solving model No. 390 from BioModels Database [36, 37]. This figure shows the evolution of the concentrations of ribulose 1,5-bisphosphate, a key metabolite for CO2 fixation in the reaction catalyzed by ribulose-1,5-bisphosphate carboxylase oxygenase (RuBisCO), and the currency metabolites ATP and ADP during the first 35s of the photosynthesis. This model was simulated using Euler’s method (KiSAO term 30) with 200 integration steps.