Identification of yeast cell cycle regulated genes based on genomic features

BMC Systems Biology

Table 1 Significant genomic features in phase specific models

TF or Motif	Function	G1	S	G2	M
Mbp1	Late	+**		_**
Swi5	M/G1, G1	+**		_**
M24	Mbp1, late G1	+**		_**	_**
M496		+**
M568		+*
M571		+*
Ndd1	G2/M	_**		+*
Fkh2	G2/M	_**		+*
M493		_**
Dot6	De-acetylation	_**
M6	Bas1, purine and hisitdine biosynthesis, meiotic recombination	_*
Met32	Methionine-biosynthesis	_*
M207		_*
Srd1	Pre-rRNA processing	_*
M12	Fkh1, G2/M		+**		_**
M46	Swi4, late G1		+**	_**	_**
M95	Met32 ′		+**		_**
M93			+*
M25	Mcm1, G2/M, M/G1		_**		+**
Ace2	M/G1		_**
M374			_**
M524			_**
Rap1	Telomere related		_*
M203			_*
YPR196W	Maltose response		_*
M103			_*
Stp4			_*
M577				_*
M357				_*
M179				_*
Met31	Methionine-biosynthesis				_*
M168					_*

“+” denotes positive contributors; “-” means negative contributors; “**” means P value < 0.01; “*” means P value < 0.05. M95 is predicted to be Met32 binding motif. Genomic features in more than one stage are highlighted in bold.

ISSN: 1752-0509