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Table 2 Summary of the three datasets used for the evaluation in this study.

From: SPIC: A novel similarity metric for comparing transcription factor binding site motifs based on information contents

 

Number of true motifs

Number of putative motifs

Number of classes

Average length

True motifs source

Data source

Dataset-1

96

0

13

10.39

JASPAR

Mahony, et al., 2007 [11]

Dataset-2

124

0

Unknown

10.6

JASPAR

Xu and Su, 2010 [25]

Dataset-3

122

1 0 5

Unknown

16

RegulonDB

Zhang, et al., 2009 [12]