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Table 1 Gap penalty of bulge in relationship with gap size and starting position

From: A computational method for predicting regulation of human microRNAs on the influenza virus genome

   Starting position of bulge (from 5' end of miRNA)
   1 2 3 4 5 >5
gap size 1 -1 -1 -2 -2 -5 -20
  2 -1 -1 -2 -2 -5 -20
  3 -2 -2 -3 -3 -8 -25
  4 -2 -2 -3 -3 -8 -25
  >4 -5 -5 -6 -6 -10 -40