Skip to main content

Table 2 AUC for the yeast gold-standard PPI data sets using single GO aspect

From: ppiPre: predicting protein-protein interactions by combining heterogeneous features

 

Binary data set

Co-complex data set

 

BP

MF

CC

BP

MF

CC

Wang

0.9246

0.7867

0.8696

0.7875

0.7482

0.8994

IntelliGO

0.8932

0.7842

0.7283

0.7882

0.7477

0.8551

TCSS

0.6178

0.6659

0.6628

0.5646

0.7891

0.8896

  1. Tests were performed separately for biological process (BP), molecular function (MF) and cellular component (CC) ontologies in two data sets. We define similarity between two proteins as the maximum similarity found between any two GO terms that annotate them. The best ROC scores for each data set are in bold.
Back to article page

BMC Systems Biology

ISSN: 1752-0509

Contact us