ppiPre: predicting protein-protein interactions by combining heterogeneous features

BMC Systems Biology

Table 4 AUC for the yeast gold-standard PPI data sets using KEGG-based and different topological similarities

	KEGG	Jaccard	AA	RA
Binary data set	0.7201	0.7819	0.7825	0.7838
Co-complex data set	0.7558	0.9988	0.9988	0.9988

Tests were performed separately for KEGG-based similarity (KEGG), Jaccard similarity (Jaccard), Adamic-Adar similarity (AA) and Resource Allocation similarity (RA) in two data sets. The best ROC scores for each data set are in bold.

ISSN: 1752-0509