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Table 8 Top 25 detected mentions in the ALZ_ARF_PMC corpus

From: PathNER: a tool for systematic identification of biological pathway mentions in the literature

Detected Mention

Freq

In AlzPathway?*

Evidence

Disease

635

N/A

N/A

Alzheimer's disease

174

N/A

N/A

Amyotrophic lateral sclerosis

130

NO

PMID: 1571856

Methylation

95

NO

PMID: 19606065

Long-Term Potentiation

78

YES

PMID: 12399581

Oxidative Stress

69

YES

PMID: 10681270

Transcription

65

N/A

N/A

Parkinson's Disease

48

NO

PMID: 12672864

Cell cycle

46

YES

PMID: 15936057

Metabolism

44

N/A

N/A

Axon guidance

32

YES

PMID: 17571925

Gene expression

31

YES

N/A

Glucose metabolism

23

NO

PMID: 21971455

Calcium signalling

20

YES

PMID: 21184278

Acetylation

18

YES

YES

Apoptosis

16

YES

PMID: 11227497

Activation of the Rac signalling pathway

15

NO

PMID: 10817927

Notch signalling

14

NO

PMID: 19853579

Prion diseases

12

NO

PMID: 15190676

Proteasome

12

NO

PMID: 10854289

S phase

12

YES

PMID: 19946466

Translation

12

N/A

N/A

Endocytosis

10

NO

PMID: 16442855

Insulin/IGF-1 Signalling

10

NO

PMID: 22817723

Post-translational modifications

9

YES

PMID: 21215781

  1. *N/A: Not applicable; the last column shows a PMID that provides evidence that a given mention is linked to AZ.