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Table 2 The matching results of all predicted clusters.

From: PPSampler2: Predicting protein complexes more accurately and efficiently by sampling

 

MCL

MCODE

DPClus

CMC

COACH

RRW

NWE

PPSampler1

PPSampler2

#protein

5869

2432

4888

5868

4094

4240

1626

2001

2009.90 ± 0.30

#cluster

880

156

925

978

1353

1984

720

350

402.10 ± 5.20

Avg. size

6.67

15.59

6.91

20.65

13.29

2.14

2.26

5.72

5.00 ± 0.06

N pc

206

27

192

79

416

196

204

188

248.40 ± 2.37

N kc

246

31

219

84

253

204

212

218

302.70 ± 3.00

  1. #protein gives the number of proteins within predicted clusters. #cluster shows the number of predicted clusters. Avg. size provides the mean of the sizes of predicted clusters.
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BMC Systems Biology

ISSN: 1752-0509

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