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Table 3 AUC scores on block-wise cross validation experiments

From: Scalable prediction of compound-protein interactions using minwise hashing

Ratio

Number

MH-L1SVM

MH-L2SVM

L1SVM

L2SVM

1

600, 404

0.66 ± 0.00

0.66 ± 0.01

0.65 ± 0.01

0.67 ± 0.01

5

1, 801, 212

0.66 ± 0.01

0.66 ± 0.01

0.66 ± 0.01

0.67 ± 0.01

10

3, 302, 222

0.66 ± 0.01

0.67 ± 0.01

0.66 ± 0.01

0.67 ± 0.01

25

7, 805, 252

0.66 ± 0.01

0.66 ± 0.01

0.65 ± 0.01

0.66 ± 0.01

50

15, 310, 302

0.66 ± 0.01

0.66 ± 0.01

0.65 ± 0.01

0.66 ± 0.01

  1. The number of negative examples is varied from the same number of positive examples to the number of negative examples 50 times larger than the number of all positive examples.