From: OMACC: an Optical-Map-Assisted Contig Connector for improving de novo genome assembly
Neighboring contigs | Gap size (bp) | Best contig path | Contig path length (bp) | Length difference | Correct |
---|---|---|---|---|---|
006+,091+ | 2326 | 006+:116+:091+ | 2327 | 1 | 1 |
004+,086+ | 10658 | 004+:005+:086+ | 10660 | 2 | 1 |
032-,046+ | 6058 | 032-:047+:046+ | 6056 | 2 | 1 |
044-,017+ | 11342 | 044-:047+:017+ | 11340 | 2 | 1 |
013+,061+ | 23861 | 013+:011-:053+:061+ | 23864 | 3 | 1 |
010+,069- | 4003 | 010+:078+:069- | 4007 | 4 | 1 |
050-,059- | 17496 | 050-:116-:059- | 17500 | 4 | 1 |
012-,036- | 20629 | 012-:011+:036- | 20635 | 6 | 1 |
086+,054- | 6739 | 086+:117-:054- | 6745 | 6 | 1 |
017+,012- | 10239 | 017+:018+:012- | 10246 | 7 | 1 |
029-,010+ | 38377 | 029-:015+:056+:116-:010+ | 38384 | 7 | 1 |
057-,079- | 29696 | 057-:053-:011+:075+:111-:080-:079- | 29703 | 7 | 1 |
023+,022+ | 40884 | 023+:117+:022+ | 40893 | 9 | 1 |
022+,002+ | 49821 | 022+:116-:068-:011-:053+:081-:116-:002+ | 49831 | 10 | 1 |
048+,044- | 27181 | 048+:028+:044- | 27191 | 10 | 1 |
002+,050- | 25463 | 002+:015+:050- | 25475 | 12 | 1 |
108+,062- | 48785 | 108+:117-:062- | 48800 | 15 | 1 |
062-,016+ | 11600 | 062-:015-:016+ | 11238 | 362 | 1 |
091+,067- | 24244 | 091+:053-:011+:067- | 23876 | 368 | 1 |
076+,029- | 10053 | 076+:028+:029- | 9285 | 768 | 1 |
001+,023+ | 29005 | 001+:117+:023+ | 29788 | 783 | 0* |
016+,033- | 8649 | 016+:083+:033- | 6842 | 1807 | 0* |