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Figure 9 | BMC Systems Biology

Figure 9

From: Inference of the Xenopus tropicalis embryonic regulatory network and spatial gene expression patterns

Figure 9

Estimated probability density distribution of the spatial patterns prediction. 1000 random networks derived from rearranging the inferred network were used to calculate the fractions of the correctly predicted genes in the 28 genes with prior patterns. (A) 1000 random networks were derived from rearranging the inferred 28-gene ODE network. They are mostly about 12% correct (the p-value is 0.007, i.e., there are only 0.7% of the 1000 random networks obtaining not less prior patterns than the inferred ODE network), while the inferred ODE network is 39.3% correct. (B) 1000 random networks were derived from rearranging the inferred 28-gene Markov network. They are mostly about 14% correct (the p-value is 0.002, i.e., there are 0.2% of the 1000 random networks obtaining not less prior patterns than the inferred Markov network), while the inferred Markov network is 39.3% correct.

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