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Table 3 Average CPU time per target gene of different methods for the yeast data

From: Fast Bayesian inference for gene regulatory networks using ScanBMA

Method

Running Time Per Gene (s)

LASSO

4.1

ARACNE

70.4

CLR

7.9

MRNET

>500

ScanBMA [20]

0.04

ScanBMA [3556]

11.2

iBMA [20]

0.08

iBMA [3556]

85

  1. ScanBMA was run with g-prior, transformed data, informative prior. Superscript indicates value of nvar.