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Table 4 Comparison of rank changes (RCs) for ERG11 in network training phase

From: Improvement of experimental testing and network training conditions with genome-wide microarrays for more accurate predictions of drug gene targets

 

ERG11

 

+ Δerg11/ERG11

+ Δerg6

+ FL

Expt analyzed

Rank change (RC)

Percentile

Rank change (RC)

Rank change (RC)

FLGI10, 1DT

488

97

−82

−75

FLGI10, 4DT

344

92

−45

142

FL GI20, 4DT

585

96

−136

−98

FL GI30, 4DT

301

88

−41

−21

FL GI40, 4DT

421

94

−70

−37

  1. RCs were reported for ERG11 across 5 FL treatment experiments, under 3 different training compendiums: + Δerg11/ERG11, + Δerg6, and + FL treatment. Percentile of RC was computed as the percentage of genes with a RC as high or higher than the target gene. RC percentiles ≥95 indicated significant perturbation as identified by SSEM-Lasso.