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Table 5 Comparison of rank changes (RCs) for ERG6 in network training phase

From: Improvement of experimental testing and network training conditions with genome-wide microarrays for more accurate predictions of drug gene targets

 

ERG6

 

+ Δerg6

+ Δerg11/ERG11

+ FL

Expt analyzed

Rank change (RC)

Percentile

Rank change (RC)

Percentile

Rank change (RC)

FLGI10, 1DT

3795

100

139

73

−292

FLGI10, 4DT

748

98

71

43

102

FL GI20, 4DT

999

99

99

57

6

FL GI30, 4DT

677

97

70

47

54

FL GI40, 4DT

123

48

67

45

52

  1. RCs were reported for ERG6 across 5 FL treatment experiments, under 3 different training compendiums: + Δerg6, + Δerg11/ERG11, and + FL treatment. Percentile of RC was computed as the percentage of genes with a RC as high or higher than the target gene. RC percentiles ≥95 indicated significant perturbation as identified by SSEM-Lasso.