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Table 4 Pathways associated with the AD pathway obtained exclusively by PANA method.

From: Pathway network inference from gene expression data

Frequency Pathway KEGG id Shared genes with AD pathway Literature evidence
4 Citrate cycle (TCA cycle) hsa00020 4 [46]
4 Pyruvate Metabolism hsa00620 0 [47, 48]
3 MAPK signaling hsa04010 19 [49, 50]
3 Peroxisome hsa04146 0 [51, 52]
3 VEGF signaling hsa04370 11 [53, 54]
3 Focal adhesion hsa04510 5 [55]
3 Aldosterone-regulated sodium reabsorption hsa04960 2 [56, 57]
3 Carbohydrate digestion and absorption hsa04973 2 [58, 50, 60]
  1. Only those rules that occur at least in three experiments are listed.
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BMC Systems Biology

ISSN: 1752-0509

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