From: Predicting protein complex in protein interaction network - a supervised learning based method
 | MIPS(training set) | TAP06(training set) | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
 | TAP06(testing set) | MIPS(testing set) | ||||||||||
Method | Num | Ncp | P | Ncb | R | F | Num | Ncp | P | Ncb | R | F |
Ours | 271 | 115 | 0.424 | 65 | 0.433 | 0.429 | 262 | 128 | 0.489 | 105 | 0.525 | 0.506 |
SCI-BN | Â | Â | 0.312 | Â | 0.489 | 0.381 | Â | Â | 0.219 | Â | 0.537 | 0.312 |
SCI-SVM | Â | Â | 0.247 | Â | 0.377 | 0.298 | Â | Â | 0.176 | Â | 0.379 | 0.24 |
MCODE | 45 | 19 | 0.422 | 19 | 0.127 | 0.195 | 45 | 18 | 0.4 | 20 | 01 | 0.160 |
ClusterOne | 173 | 83 | 0.480 | 69 | 0.46 | 0.470 | 173 | 74 | 0.428 | 87 | 0.435 | 0.431 |
COACH | 294 | 114 | 0.387 | 80 | 0.533 | 0.449 | 294 | 107 | 0.364 | 99 | 0.495 | 0.419 |
CMC | 161 | 72 | 0.447 | 53 | 0.353 | 0.395 | 161 | 74 | 0.460 | 76 | 0.380 | 0.416 |
 | MIPS, Aloy and SGD(training set) | TAP06, Aloy and SGD(training set) | ||||||||||
 | TAP06(testing set) | MIPS(testing set) | ||||||||||
Ours1 | 274 | 119 | 0.434 | 69 | 0.46 | 0.447 | 270 | 142 | 0.526 | 102 | 0.51 | 0.518 |