Figure 3
From: TimeXNet: Identifying active gene sub-networks using time-course gene expression profiles
TimeXNet user interface. The TimeXNet user interface consists of three main panels - the input panel, the progress panel and the output panel. TimeXNet requires three scored gene lists, a weighted interaction network and two real positive constants in order to run. Sample data for evaluation can be loaded into the user interface using the "Load Sample" button. During execution, TimeXNet updates the progress panel to inform the user of the current status. After completion, the tables in the output panel are populated with the genes and interactions in the predicted response network along with their type and flow. The "View Network" button invokes Cytoscape to show the response network predicted by TimeXNet.