From: A regulatory similarity measure using the location information of transcription factor binding sites in Saccharomyces cerevisiae
RS measure
Equation
Garten et al.1
- log ∑ x ≥ k min ( m , n ) m x N - m n - x N n Eq. (1)
Veerla and Höglund
T F a ∩ T F b T F a ∪ T F b Eq. (2)
Shalgi et al.
T F a ∩ T F b min T F a , T F b Eq. (3)
Park et al.2
S = ∑ j = 1 2 γ j ∑ i f i j - 1 / 2 2 N 1 i j + N 2 i j + α C i j - β N 1 i j + N 2 i j I C i j = 0 Eq. (4)
van Helden2
M a b = S a b - α D a b + β Eq. (5)