Skip to main content

Table 3 TFBS qualities and quantities

From: A regulatory similarity measure using the location information of transcription factor binding sites in Saccharomyces cerevisiae

Quality1

Quantity2

#Genes3

Density4

0.1

313746

6332

49.5

0.2

220938

6311

35.0

0.3

169405

6292

26.9

0.4

134111

6272

21.4

0.5

106299

6245

17.0

0.6

84066

6192

13.6

0.7

65011

6080

10.7

0.8

47955

5903

8.1

0.9

30785

5527

5.6

  1. 1Posterior probability cutoff in the SwissRegulon database. The higher cutoff, the better TFBS quality. 2Number of annotated TFBS locations in the SwissRegulon database under the corresponding cutoff. 3Number of genes whose promoter has at least one annotated TFBS in the SwissRegulon database under the corresponding cutoff. 4Quantity / #Genes.