BMC Systems Biology

Table 5 Pairwise network alignment results for real PPI networks.

From: Accurate multiple network alignment through context-sensitive random walk

	H.sa-S.ce			D.me-S.ce			C.el-S.ce
	CN	SPE	MNE	CN	SPE	MNE	CN	SPE	MNE
Proposed	1307	0.689	0.310	1725	0.727	0.277	1543	0.796	0.196
SMETANA	1190	0.671	0.331	1579	0.709	0.295	1443	0.771	0.222
BEAMS	1306	0.649	0.347	1636	0.675	0.320	1499	0.742	0.247
PINALOG	1100	0.682	0.324	1368	0.722	0.289	640	0.737	0.266
IsoRankN	1367	0.765	0.238	1641	0.777	0.230	1458	0.843	0.155
Node Similarity	1486	0.740	0.259	1832	0.779	0.224	1670	0.831	0.163
	D.me-H.sa			D.me-C.el			C.el-H.sa
	CN	SPE	MNE	CN	SPE	MNE	CN	SPE	MNE
Proposed	2681	0.724	0.279	2714	0.855	0.146	1995	0.771	0.224
SMETANA	2274	0.671	0.331	2458	0.827	0.175	1684	0.737	0.255
BEAMS	2612	0.658	0.338	2738	0.808	0.192	1941	0.691	0.300
PINALOG	1172	0.604	0.412	672	0.689	0.317	482	0.677	0.325
IsoRankN	2635	0.759	0.246	2488	0.851	0.150	1881	0.783	0.216
Node Similarity	2932	0.750	0.251	2897	0.875	0.125	2185	0.770	0.227

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ISSN: 1752-0509

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