Table 2 Comparisons between StochKit and our approach for a chain of N reactions of the shape A i → Ai+1.
From: Modelling non-Markovian dynamics in biochemical reactions
N. | Gecode | StochKit |
|---|---|---|
1 | 0.008 | 0.019 |
2 | 0.012 | 0.034 |
3 | 0.012 | 0.056 |
4 | 0.014 | 0.086 |
5 | 0.015 | 0.126 |
6 | 0.017 | 0.167 |
7 | 0.018 | 0.208 |
8 | 0.02 | 0.26 |
9 | 0.021 | 0.3 |
10 | 0.022 | 0.354 |
11 | 0.022 | 0.424 |
12 | 0.027 | 0.447 |
13 | 0.028 | 0.494 |
14 | 0.028 | 0.545 |
15 | 0.03 | 0.592 |
16 | 0.033 | 0.654 |
17 | 0.033 | 0.714 |
18 | 0.037 | 0.758 |
19 | 0.039 | 0.818 |
20 | 0.039 | 0.87 |