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Table 1 Information of datasets used.

From: Connectivity mapping using a combined gene signature from multiple colorectal cancer datasets identified candidate drugs including existing chemotherapies

Dataset

Stage

Samples

Platform

TotalGenes

SignificantGenes

GSE21510

2-3

30(15pairs)

HG-U133Plus2

54675

4025

GSE41258

2-3

38(19pairs)

HG-U133A

22283

929

GSE21510

4

8(4pairs)

HG-U133Plus2

54675

7

GSE41258

4

36(18pairs)

HG-U133A

22283

663

GSE49355

4

30(15pairs)

HG-U133A

22283

1323

Combined Dataset

2-4

142(71pairs)

 

22277

4757