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Figure 2 | BMC Systems Biology

Figure 2

From: Reconstruction and modeling protein translocation and compartmentalization in Escherichia coli at the genome-scale

Figure 2

Proteome expression comparison between i OL1650-ME and i JL1678-ME. The difference that the protein translocation reconstruction brings to i OL1650-ME is compared through computed protein expression in glucose M9 minimal media conditions. (A) Protein translation flux between i JL1678-ME and i OL1650-ME. The majority of pORF expression (93.5%) are approximately the same in both model simulations, but 4.1% are uniquely expressed in i JL1678-ME, and 0.4% is uniquely expressed in i OL1650-ME (points along the -inf line). 2.0% of the proteins are differentially expressed, the majority of which are expressed to a greater extent in i JL1678-ME than in i OL1650-ME, but two proteins involved in small carbon metabolism (EutD and PurT) are expressed lower. (B) Histograms detailing the functional annotations of the uniquely expressed genes within the two models.

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