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Table 2 Hub proteins identified in the zebrafish intracellular PPI network for secondary infection

From: The role of TGF-β signaling and apoptosis in innate and adaptive immunity in zebrafish: a systems biology approach

Rank

Zebrafish protein

Degree

GO functional annotation

1

Psmd1

16

Antigen processing and presentation of exogenous peptide antigen via MHC class I

2

Fos

12

Innate immune response

3

Psmd13

11

Antigen processing and presentation of exogenous peptide antigen via MHC class I

4

Ndrg1

10

Mast cell activation

5

Casp2

10

Regulation of apoptosis

6

Gch2

10

Response to interferon-γ

7

Ncstn

9

T cell proliferation

8

Acvr1b

9

TGF-β receptor activity

9

Uba5

9

Protein ubiquitination

10

Usp14

8

Regulation of proteasomal protein catabolic process