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Table 3 Description of workflows implemented in MetaNET

From: MetaNET - a web-accessible interactive platform for biological metabolic network analysis

MetaNET published workflows Description No. of steps involved
Automated Flux Balance Analysis Workflow Used to perform FBA of metabolic network using default objective function 6
Customized Flux Balance Analysis Workflow Used to perform FBA of metabolic network using user-defined objective function 5
Gene Essentiality Workflow Used to investigate lethal genes 8
Reaction Essentiality Workflow Used to investigate lethal reactions 7
Catalyst Essentiality workflow Used to investigate lethal catalysts 8
Pairwise Genes knock-out Workflow Used to knock-out genes pairwise 8
Pairwise Reactions knock-out Workflow Used to knock-out reactions pairwise 8
Pairwise Catalysts knock-out workflow Used to knock-out catalysts pairwise 8