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Table 1 Comparison of ZUIs for metabolic models

From: Mimoza: web-based semantic zooming and navigation in metabolic networks

  

Semantic

User’s

Automatic

 

Tool name

Imposed layout

Zoom

Model

Layout

Modules

Genome projector

yes

no

no

-

no

NaviCell

no

if created

yes

no

yes

  

by user

   

Cellular overview

yes

no

no

-

no

Reactome

yes (same pathw. diff. org.) /

yes

no

-

yes

 

no (diff. pathw. same organism)

    

Mimoza

no

yes

yes

yes

yes