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Table 6 The comparison results using the original model given by GeneNet and the five time-courses generated from WNTA5A network with Gaussian system noise of mean 0 and variance 0.05

From: Genomic data assimilation using a higher moment filtering technique for restoration of gene regulatory networks

  PR RR F-measure TP FP TN FN
HMEnPF 0.705 0.633 0.665 19.0 8.0 52.0 11.0
UKF 0.649 0.567 0.604 17.0 9.2 50.8 13.0
GeneNet 0.453 0.543 0.492 11.4 14.0 10.0 9.6
  1. The comparison results of the proposed algorithm, the previous algorithm using UKF only [36], and GeneNet for the five time-courses generated from WNTA5A network with Gaussian system noise of mean 0 and variance 0.05. The results of ‘PR’, ‘RR’, ‘F-measure’, ‘TP’, ‘FP’, ‘TN’ and ‘FN’ for the five time-courses were averaged. The networks inferred by GeneNet were used as the original networks for the former two algorithms.