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Table 2 Descriptions for the model parameters

From: Analyzing Th17 cell differentiation dynamics using a novel integrative modeling framework for time-course RNA sequencing data

Parameter

Description

θ 1

conversion rate for IL6

θ 2

basal expression, STAT3

θ 3

autoregulation, STAT3

θ 4

mRNA degradation, STAT3

θ 5

translation, STAT3

θ 6

phosphorylation, STAT3

θ 7

protein degradation, STAT3

θ 8

phosphoprotein degradation, STAT3

θ 9

conversion rate for TGF β

θ 10

ROR γt activation by TGF β and STAT3

θ 11

ROR γt inhibition by FOXP3

θ 12

ROR γt degradation

θ 13

basal expression, FOXP3

θ 14

FOXP3 activation by TGF β

θ 15

FOXP3 inhibition by STAT3

θ 16

mRNA degradation, FOXP3

θ 17

translation/phosphorylation, FOXP3

θ 18

protein degradation, FOXP3