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Table 2 Odds ratio logistic regression associations GWAS on compound phenotypes. Entries show locus w/ minor allele, and the odds ratio, 95 % confidence interval, and p-value for the SNP vs. the phenotype

From: Characterizing redescriptions using persistent homology to isolate genetic pathways contributing to pathogenesis

Locus

Association

OR

Minor Allele

 

(95 % CI)

  

p-value

rs12365545

DxT2D

1.69

A

 

(1.38–2.07)

  

4.434×10−7

rs12365545

DxHT

1.44

A

 

(1.24–1.67)

  

8.329×10−7

rs6847235

DxHL

1.45

A

 

(1.25–1.68)

  

5.344×10−7

rs701319

DxHL

0.57

T

 

(0.46–0.71)

  

6.821×10−7

  1. Genome wide p-value threshold =6.338×10−7