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Table 4 Composition of the four clusters obtained using the GM-A model

From: Modelling the influence of dimerisation sequence dissimilarities on the auxin signalling network

\(C1^{\text {ARF+}}_{\texttt {GM-A}}\) ARF5 (0.01), ARF7, ARF8, IAA9, ARF19, ARF6 (0.019)
\(C2^{\text {ARF-}}_{\texttt {GM-A}}\) ARF1 (0.012), ARF10, IAA6, IAA11, ARF4 (0.013), ARF14, ARF16, ARF18, , ARF20 (0.014), ARF12 (0.015), ARF13, ARF2 (0.016)
\(C3^{\text {IAA}}_{\texttt {GM-A}}\) IAA15 (0.028), IAA10, IAA31, IAA2, IAA14, IAA1 (0.031), IAA12, IAA18, IAA4 (0.033), IAA17, IAA27, IAA19 (0.034), IAA3, IAA8, IAA16, IAA28,
  IAA34, IAA5 (0.036)
\(C4^{\text {Outlier}}_{\texttt {GM-A}}\) (0.019), (0.024), (0.024)
  1. The ARF activators are in bold. The proteins that are assigned to the two outlier clusters in the 5-cluster GM-A model are respectively in blue and cyan. The distance D(i, q) between protein i and its cluster q is given for the most central, the most peripheral and some other proteins of interest for interpretation. See Additional file 1: Figure S4A for the distance plot