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Table 7 Composition of the four clusters obtained using the single-explanatory-variable LRM model

From: Modelling the influence of dimerisation sequence dissimilarities on the auxin signalling network

\(C1^{\text {ARF+}}_{\texttt {LRM-1}}\)

ARF5 (0.022), ARF6, ARF7, ARF8, ARF19 (0.024), IAA31 (0.027), IAA7 (0.029), IAA13 (0.029)

\(C2^{\text {ARF-}}_{\texttt {LRM-1}}\)

ARF1 (0.012), ARF10, ARF16, IAA6, IAA11, ARF4 (0.013), ARF14, ARF18, ARF2 (0.015), ARF13, ARF12 (0.016)

\(C3^{\text {IAA}}_{\texttt {LRM-1}}\)

IAA10 (0.029), IAA15, IAA14 (0.03), IAA12 (0.031), IAA1, IAA2, IAA18, IAA27 (0.033), IAA17, IAA19, IAA28, IAA4 (0.035), IAA16, IAA34, IAA3, IAA5,

 

IAA8, IAA9 (0.037)

\(C4^{\text {Outlier}}_{\texttt {LRM-1}}\)

IAA29 (0.018), ARF22, IAA33, ARF20, IAA26, IAA32, IAA20, IAA30, ARF9 (0.026)

  1. The ARF activators are in bold. The distance D(i, q) between protein i and cluster q to which it is assigned is given for the most central, the most peripheral and some other proteins of interest for interpretation. See Additional file 1: Figure S11 for the distance plot