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Table 6 Sensitivity and runtimes comparison using real tumors

From: SNVSniffer: an integrated caller for germline and somatic single-nucleotide and indel mutations

Dataset SNVSniffer(M1) VarScan2 SomaticSniper JSM2 MuTect
Sensitivity (%)  
T1 66.86 38.29 61.148 0.001 91.43
T2 82.35 35.29 63.73 0.00 93.14
T3 72.36 59.35 75.61 0.00 95.93
T4 93.55 83.87 87.10 0.00 96.77
T5 75.00 43.75 68.75 0.00 97.92
Time (h)  
T1 2.67 5.75 1.58 10.41 22.87
T2 2.56 4.73 1.33 9.48 19.37
T3 2.41 4.30 1.34 7.39 19.27
T4 2.91 5.26 1.39 10.00 24.16
T5 2.87 4.75 1.55 8.11 20.50
  1. Best results are highlighted in boldface