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Table 2 The number of peak calls of functional elements in the dataset used for training and prediction for the cell types: H1, IMR90, HeLa S3, and Hep G2, obtained through ChIP-seq and DNase-seq

From: Opening up the blackbox: an interpretable deep neural network-based classifier for cell-type specific enhancer predictions

 

H1 (100 bp)

IMR90 (100 bp)

HeLa S3 (100 bp)

Hep G2 (100 bp)

DHS

150,729

149,787

N/A

N/A

TSS

9299

8000

21,165

50,070

p300

13,523

52,988

30,004

36,527

CBP

12,958

N/A

N/A

N/A

TF

71,173

N/A

N/A

N/A