Skip to main content

Table 2 Transcriptional profiles and a protein expression map of enzyme-encoding genes, TFs, and TF target genes and enzymes in Arabidopsis root apical meristem (vasculature)

From: The Arabidopsis phytohormone crosstalk network involves a consecutive metabolic route and circular control units of transcription factors that regulate enzyme-encoding genes

Enzyme

Expressed TFs, TF target genes

Expressed genes encoding enzymes

Protein expression

Crosstalk

(EC 1.3.1.-)

(Step 1)a

 

AT3G55360

AT3G55360

Abscisic acid

Brassinosteroid

EC 1.14.13.-

(Step 2)a

DWF4(AT3G50660)

EIL3(AT1G73730)

BZR1(AT1G75080)

AT2G27690

AT5G04660

AT4G36380

AT5G38970

AT5G48000

Brassinosteroid

Jasmonic acid

EC 2.4.1.-

(Step 3)a

FT1(AT2G03220)

VRN1(AT3G18990)

UGT78D2(AT5G17050)

AT3G53160 AT3G21750

AT4G34138 AT1G73880

AT4G34135 AT1G78270

AT1G06000 AT2G30140

AT5G40390 AT2G28080

AT1G06000

Abscisic acid

Auxin

Brassinosteroid

Cytokinin

Salicylic acid

EC 1.14.11.23

(Step 5)a

MYB32(AT4G34990)

HY5(AT5G11260)

FLS1(AT5G08640)

MYB12(AT2G47460)

RGA1(AT2G01570)

GAI(AT1G14920)

AT3G50210

AT3G49630

AT3G19010

AT4G16770

 

Gibberellin

Jasmonic acid

EC 2.1.1.-

(Step 6)a

 

AT3G63410 AT5G54160

AT3G63410

Auxin

Gibberellin

EC 1.14.11.-

(Step 7)a

SPT(AT4G36930)

MYB32(AT4G34990)

GA2OX6(AT1G02400)

CBF1(AT4G25490)

GAI(AT1G14920)

DAG1(AT3G61850)

RGA1(AT2G01570)

DDF1(AT1G12610)

HY5(AT5G11260)

AT1G14130

 

Ethylene

Gibberellin

Jasmonic acid

EC 1.2.3.7

(Step 8)a

AAO1(AT5G20960)

AT2G27150

 

Abscisic acid

Auxin

EC 2.4.1.121

(Step 9) a

 

AT4G15550

 

Abscisic acid

Auxin

Salicylic acid

EC 6.3.-.-:

(Step 10)a

ARF7(AT5G20730)

DFL1(AT5G54510)

WES1(AT4G27260)

AT2G46370

 

Abscisic acid

Auxin

Jasmonic acid

EC 2.6.1.57

(Step 11)a

 

AT1G70560 AT1G62960

AT5G51690

 

Abscisic acid

Auxin

Jasmonic acid

EC 4.4.1.14

(Step 12)a

ACS6(AT4G11280)

MP(AT1G19850)

ARF2(AT5G62000)

ACS2(AT1G01480)

ACS8(AT4G37770)

AT5G51690 AT1G62960

 

Auxin

Cytokinin

Ethylene

Jasmonic acid

EC 1.14.17.4

(Step 13)a

EIN3(AT3G20770)

ATHB-1(AT3G01470)

ATACO2(AT1G62380)

AT1G05010 AT1G77330

 

Ethylene

EC 2.5.1.18

OBP1(AT3G50410)

GSTF8(AT2G47730)

ANAC019(AT1G52890)

AP2.3(AT3G16770)

AT2G30870 AT2G29440

AT2G29490 AT5G41210

AT1G75270 AT1G17170

AT1G27140 AT2G29480

AT2G30860 AT1G17190

AT4G19880 AT5G45020

AT5G41240 AT5G41220

AT5G44990 AT1G78340

AT2G29420 AT1G27130

AT2G29460 AT1G17180

AT2G29450 AT1G78380

AT2G29470 AT2G02390

AT2G30870

AT2G30860

AT2G47730

AT1G78380

Ethylene

Jasmonic acid

Salicylic acid

EC 1.1.1.1

MYC2(AT1G32640)

RAP2.12 (AT1G53910)

ADH1(AT1G77120)

ABF2(AT1G45249)

CBF2(AT4G25470)

MYB2(AT2G47190

AT5G43940 AT5G63620

AT5G19440 AT5G24760

AT5G43940

AT5G19440

Ethylene

Salicylic acid

EC 1.13.11.12

LOX3 (AT1G17420)

MYC2 (AT1G32640)

ORA47 (AT1G74930)

STZ(AT1G27730)

WRKY6(AT1G62300)

WRKY3(AT2G03340)

ANAC055(AT3G15500)

ANAC019(AT1G52890)

WRKY11(AT4G31550)

AT3G22400 AT1G67560

 

Abscisic acid

Jasmonic acid

EC 1.14.11.13

GA2OX6(AT1G02400)

DDF1(AT1G12610)

CBF1(AT4G25490)

AT1G14130 AT1G14120

 

Ethylene gibberellin

EC 1.14.13.93

BZR1(AT1G75080)

CPD(AT5G05690)

DWF4(AT3G50660)

AT4G19230

AT5G45340

AT5G38970

AT4G36380

AT5G48000

AT5G05690

Abscisic acid

Brassinosteroid

Ethylene

EC 2.3.1.74

TT4(AT5G13930)

MYB12(AT2G47460)

HYH(AT3G17609)

 

AT5G13930

Auxin

Jasmonic acid

EC 1.14.19.2

 

AT5G16240

AT2G43710

AT3G02630

AT3G02630

AT2G43710

Jasmonic acid

Salicylic acid

EC 1.1.1.288

 

AT1G52340

 

Abscisic acid

Brassinosteroid

EC 2.4.1.12

VND7(AT1G71930)

AT5G16910 AT3G03050

AT5G64740 AT5G09870

AT4G32410 AT4G39350

AT5G05170 AT2G21770

AT1G55850 AT2G33100

AT1G71930

AT4G32410

AT5G64740

AT5G05170

Abscisic acid

Ethylene

Jasmonic acid

EC 2.4.1.215

 

AT3G53160 AT1G78270

AT2G28080 AT2G30140

 

Brassinosteroid

Cytokinin

EC 2.4.1.237

 

AT1G73880 AT4G34138

AT2G15490 AT4G34135

AT5G59580 AT5G59590

AT1G07250

 

Abscisic acid

Auxin

Brassinosteroid

Salicylic acid

EC 2.4.1.263

 

AT4G34138 AT4G15550

AT4G34135 AT1G07260

AT2G30150 AT2G31750

AT1G07250

 

Abscisic acid

Auxin

Salicylic acid

EC: 2.4.1.195

 

AT1G05680 AT2G30150

AT2G31750 AT1G24100

 

Abscisic acid

Salicylic acid

  1. aIndicates consecutive metabolic route of controlling sets in the EAPCN model (see Fig. 3).