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Table 1 Summary of targets validated

From: The effect of inhibition of PP1 and TNFα signaling on pathogenesis of SARS coronavirus

Rank

Network Bottleneck

Network hub

WGCNA

Differential expression**

1

*Stat1

*Ccr5

*Myd88

Cxcr3

2

*Ccr5

*Myd88

*Ccr5

*Ccr5

3

*Myd88

*Stat1

Cxcr3

*Serpine1

4

*Kepi

*Kepi

*Stat1

*Ccr1

5

*Serpine1

Cxcr3

*Kepi

Ido1

6

*Ccr1

Ido1

Ido1

Plat

7

Cxcr3

*Ccr1

Plat

*Stat1

8

Plat

*Serpine1

*Serpine1

Il1r1

9

Ido1

Il28ra

Il28ra

Il18r1

10

Ptges2

Plat

*Ccr1

*Ccr2

11

Il1r1

*Ccr2

*Ccr2

*Myd88

12

Il28ra

Ptges2

Il18r1

Ifnar

13

*Ccr2

Il1r1

Ptges2

Il28ra

14

Ifnar

Il18r1

Il1r1

Ptges2

15

Il18r1

Ifnar

Ifnar

*Kepi

  1. Asterisks(*) designate null mice with altered weight loss phenotypes. Each column represents a ranking of the genes using the indicated metric. Ccr1, Ccr2, Ccr5, Myd88, Il18r1, and Il1r1 assessed in Sheahan et al. 2008 [30]. Stat1, Ifnar, and IL28ra assessed in Frieman et al. 2010 [29]. Serpine1 and Plat assessed in Gralinski etal. 2013 [20]. All others assessed in the current study. For Stat1 and Ifnar, background strain used was 129. For Il28ra, background strain used was Balb/c. **Ranked by absolute differential expression versus mock at day 1 post-infection